 |
Job Description | P76639 | Confidence | 23.37% | Date | Thu Jan 5 12:25:10 GMT 2012 |
Rank | 242 | Aligned Residues | 46 |
% Identity | 11% | Template | c3f8mA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:gntr-family protein transcriptional regulator; |
PDBTitle: crystal structure of phnf from mycobacterium smegmatis
|
Resolution | 1.80 Å |
|
  |   |
53 | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | M | I | I | E | S | V | W | . |
. |
K | N | I | I | V | S | D | E | S | L | T | R | C | . |
. |
. |
. |
I | Y | S | L | R | C | I | F | E | K | I | G | Y | D | R | C | I | E | T | I | Y | R | K | G | Y |
Query Conservation |   |
  |   |   |
|   |   |   |
|
| . | . |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
| . |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
| . |   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |
|   |
|
|
Template Sequence |   |
L | D | R | M | L | D | G | . |
M | R | I | G | D | P | F | P | A | E | R | E | I | A | E | Q | F | E | V | A | R | E | T | V | R | Q | A | L | R | E | L | L | I | D | G | R | V | E | R | R | G | R | T | T | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . |
|
| T | T |
| B |
|
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|