Job Description P76639 Confidence 97.26% Date Thu Jan 5 12:25:10 GMT 2012 Rank 129 Aligned Residues 174 % Identity 10% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		M	L	A	G	K	K	E	L	Y	D	F	T	P	E	.	S	I	Y	R	A	M	T	I	F	D	R	L	Q	N	K	S	D	I	Q	T	L	K	T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	S	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D
Query Conservation																.
Alig confidence																.												.	.	.							.	.	.												.	.	.	.	.	.	.	.
Template Conservation																												.	.	.							.	.	.												.	.	.	.	.	.	.	.
Template Sequence		L	A	Q	V	L	L	Y	R	T	Q	G	T	Y	D	Q	H	L	D	D	V	E	R	I	C	K	A	.	.	.	A	L	N	T	T	D	.	.	.	I	C	Y	V	E	L	A	T	V	Y	Q	.	.	.	.	.	.	.	.	K	Q	P	E	Q	Q	A	E	L	L	K	Q	M	E	A	G	V	S	R	G	T	V	T
Template Known Secondary structure												S		T	T	T												.	.	.		T	T	T		T	.	.	.	T											.	.	.	.	.	.	.	.			G	G	G															T		S
Template Predicted Secondary structure																												.	.	.							.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		338	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure														.	.	.																																								.	.	.
Query SS confidence														.	.	.																																								.	.	.
Query Sequence		G	K	I	L	A	I	M	G	L	I	T	G	.	.	.	L	S	G	Q	A	K	V	S	H	I	L	F	E	Q	A	K	I	H	S	T	D	I	A	S	L	Y	Y	Y	R	A	L	V	H	F	H	N	E	K	I	.	.	.	E	E	A	R	I	C	I	D	K	S	L	Q	L	E	P	R	R	R	K	A	V	V	I
Query Conservation														.	.	.																																								.	.	.
Alig confidence														.	.	.																		.	.																					.	.	.															.	.
Template Conservation																																		.	.																																						.	.
Template Sequence		A	Q	R	V	D	S	V	A	R	V	L	G	D	A	T	L	G	T	P	D	E	K	T	A	Q	A	L	L	E	K	I	A	.	.	P	G	Y	P	A	S	W	V	S	L	A	Q	L	L	Y	D	F	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	G	R	A	A	D	.	.	Q	P	R	A	E	L	L
Template Known Secondary structure													T		T	T	S	S	S														T	.	.	T	T	S	T														T	T	S																T	T	.	.
Template Predicted Secondary structure																																		.	.																																						.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	C	V	D	M	Y	V	P	N	P	L	K	N	N	I	K	L	Y	Y	K	E	T	E	S	E	S	H	R	V	I	I	D	N	I	L	K	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	K	L	Y	Y	E	G	K	W	V	P	A	D	A	K	A	A	E	A	H	F	E	K	A	V	G	R	E	V	A	A	D	Y	Y	L	G	Q	I
Template Known Secondary structure										S	S	S													T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions