Return to main results Retrieve Phyre Job Id

Job DescriptionP76639
Confidence68.47%DateThu Jan 5 12:25:10 GMT 2012
Rank177Aligned Residues57
% Identity18%Templatec2jpcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:ssrb; PDBTitle: ssrb dna binding protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 






















Query SS confidence 
































































Query Sequence  KELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGY
Query Conservation       
  
            
   

         
   
  

  
        
 
    

Alig confidence 











....








....



































Template Conservation 

  

   
 
.... 
  


  ....
 

  

      
  

 
  
  

  
   

Template Sequence  RERQVLKLIDEG. . . . YTNHGISEK. . . . LHISIKTVETHRMNMMRKLQVHKVTELLNCARRMRL
Template Known Secondary structure  TS....

S....T
S
T
SS
S

Template Predicted Secondary structure 


....

....









Template SS confidence 
































































   16...20....... ..30...... ...40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions