Job Description P76639 Confidence 20.93% Date Thu Jan 5 12:25:10 GMT 2012 Rank 247 Aligned Residues 117 % Identity 14% Template c1zb1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:bro1 protein; PDBTitle: structure basis for endosomal targeting by the bro1 domain Resolution 1.95 Å

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		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	R	A	M	T	I	F	D	R	L	Q	N	K	S	D	I	Q	T	L	K	T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	S	E	L	E	L	A	A	Q	K	A	L	E	L	L	D	Y	V	S	D	I	T	T	V	D	G	K	I	L	A	I	M	G	L	I	T	G	L	S	G	Q
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	K	A	F	S	C	F	E	Y	L	S	E	N	F	L	N	S	P	S	V	D	L	Q	S	E	N	T	R	F	L	A	N	I	C	.	.	.	.	.	.	.	.	.	.	.	H	A	E	A	Q	E	L	F	V	L	K	L	L	N	D	Q	I	S	S	K	Q	Y	T	L	I	S	K	L	S	R	A	T	C	N
Template Known Secondary structure																				S	S	G	G	G													.	.	.	.	.	.	.	.	.	.	.													T	T	S	T	T	G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.												.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
			354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370																		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	K	V	S	H	I	L	F	E	Q	A	K	I	H	S	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	S	L	Y	Y	Y	R	A	L	V	H	F	H	N	E	K	I	E	E	A	R	I	C	I	D	K	S	L	Q	L
Query Conservation		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	Q	K	C	H	D	F	M	K	E	I	D	D	D	V	A	I	Y	G	E	P	K	W	K	T	T	V	T	C	K	L	H	F	Y	K	S	L	S	A	Y	Y	H	G	L	H	L	E	E	E	N	R	V	G	E	A	I	A	F	L	D	F	S	M	Q	Q
Template Known Secondary structure												S				T	T	T	S	S	S																														T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions