Job Description P76639 Confidence 98.24% Date Thu Jan 5 12:25:10 GMT 2012 Rank 122 Aligned Residues 158 % Identity 15% Template c1xi4D_ PDB info PDB header:endocytosis/exocytosis Chain: D: PDB Molecule:clathrin heavy chain; PDBTitle: clathrin d6 coat Resolution 7.90 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.				.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																			.							.	.	.								.	.
Query SS confidence																																																			.							.	.	.								.	.
Query Sequence		P	E	S	I	Y	R	A	M	T	I	F	D	R	L	Q	N	K	S	D	I	Q	T	L	K	T	E	C	Y	C	L	L	A	E	C	H	M	S	L	A	L	H	G	K	S	E	L	E	L	A	.	A	Q	K	A	L	E	.	.	.	L	L	D	Y	V	S	D	.	.	I	T	T	V	D	G	K	I	L	A	I	M
Query Conservation																																																			.							.	.	.								.	.
Alig confidence																					.	.																													.							.	.	.								.	.
Template Conservation																					.	.
Template Sequence		K	A	D	R	T	R	V	M	E	Y	I	N	R	L	D	N	Y	D	A	.	.	P	D	I	A	N	I	A	I	S	N	E	L	F	E	E	A	F	A	I	F	R	K	F	D	V	N	T	S	A	V	Q	V	L	I	E	H	I	G	N	L	D	R	A	Y	E	F	A	E	R	C	N	E	P	A	V	W	S	Q	L
Template Known Secondary structure																	S	S			.	.											T												T	T												S													T		S		T
Template Predicted Secondary structure																					.	.
Template SS confidence
		1034	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.			.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	I	T	G	L	S	G	Q	A	K	V	S	H	I	L	F	E	Q	A	K	I	H	S	T	D	I	A	S	L	Y	Y	Y	R	A	L	V	H	F	H	N	E	K	I	E	E	A	R	I	C	I	D	K	S	L	Q	L	E	P	R	R	R	K	A	V	V	I	K	E	C	V	D	M	Y	V	P	N	P	L	K
Query Conservation
Alig confidence																						.	.	.	.	.																																				.	.
Template Conservation																						.	.	.	.	.																																				.	.
Template Sequence		A	K	A	Q	L	Q	K	G	M	V	K	E	A	I	D	S	Y	I	K	A	.	.	.	.	.	D	D	P	S	S	Y	M	E	V	V	Q	A	A	N	T	S	G	N	W	E	E	L	V	K	Y	L	Q	M	A	R	K	K	A	R	E	.	.	S	Y	V	E	T	E	L	I	F	A	L	A	K	T	N	R	L	A
Template Known Secondary structure										S	T	T	T							T	S	.	.	.	.	.							T									T	T													T	T	T				.	.	T	T											S	S	S
Template Predicted Secondary structure																						.	.	.	.	.																																				.	.
Template SS confidence
		1112	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.						.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.			.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	I	K	L	Y	Y	K	E	T	E	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	E	E	F	I	N	G	P	N	N	A	H
Template Known Secondary structure									S				S
Template Predicted Secondary structure
Template SS confidence
		1185	.	.	.	.	1190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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