Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABK9
Confidence100.00%DateThu Jan 5 11:15:44 GMT 2012
Rank7Aligned Residues423
% Identity32%Templated1oaha_
SCOP infoMultiheme cytochromes Multiheme cytochromes Di-heme elbow motif
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60... ......70.........80.........90...
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Query Sequence  AKPVTVEAKNETFAPQHPDQYLSWKATSEQS. . . . . . . . . . . . . . . . . . . ERVDALAEDPRLVILWAGYPFSRDYNKPRG
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Template Sequence  TGIAETETKMSAFKGQFPQQYASYMKNNEDRIMTDYKGSVPYHKNDNVNPLPKGFKHAQPYLKNLWLGYPFMYEYNETRG
Template Known Secondary structure 



TT


GGGGTTT
GGG



B
SS
BS


BTT
SSS
TTT

TT

TTTTTSGGGT

B



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   38.40.........50.........60.........70.........80.........90.........100.........110.......
 
   94.....100.........110.........120.........130.........140.........150.... .....160........
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Query Sequence  HAFAVTDVRETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEI. . . . . VNNLGCADCHNTAS
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Template Sequence  HTYAIDDFLNIDRINRFAADGKGNLPATCWNCKTPKMMEWVSQYGDKFW. SMDVNEFRAKDKINAHDETIGCANCHDPAT
Template Known Secondary structure  GGG
TTS



TT


SSBGGGGTTT
TTGGGTT.TSBGGGG
STTT

TTTSSS
GGGTB
TTT
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   118.120.........130.........140.........150.........160...... ...170.........180.........190......
 
   169170.........180.........190.........200.........210.........220. ........230.........240....
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Query Sequence  PEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYFDGK. . . . NKAVKFPWDDGMKVENMEQYYDK
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Template Sequence  . . . . . . . MELRLYSEPLKDWLKRSGKDWQKMSRNEKRTLVCAQCHVEYYFTHKDNGPAAKPVFPWDNGFNPEDMYQYYKG
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B



TT

GGGS
TTSS



TTTSSTT



TT
SSTTS
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   197..200.........210.........220.........230.........240.........250.........260.........
 
   245....250.........260.........270.........280.........290.........300.........310. ..
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Query Sequence  . . . . . . . . . . IAFSDWTNSLSKTPMLKAQHPEYETWTAGIHGKNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFA. QT
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Template Sequence  HGAKGPDGKPGPFVDWVHAASKVPMIKMQHPEYETFQDGPHGAAGVSCADCHMQY. . . . . . . . ISSHWMTSPMKDPEMRA
Template Known Secondary structure 
TTS


S
TTT







TTSTTGGGT

S

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S
GGG
TT
TT
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   270.........280.........290.........300.........310.........320.... .....330.........340.
 
   314.....320 .........330.........340.........350....... ..360.........370.........380.......
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Query Sequence  CANCHTQ. DKAALQKVVAERKQSINDLKIKVEDQLVHAHFEAKAA. . . . . LDAGATEAEMKPIQDDIRHAQWRWDLAIAS
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Template Sequence  CRQCHADKTGEYLRQRVLYTQQKTFDQLLKAQEMSVKAHEAVRLANAYEGHRAANYEALMAEAREMVRKGQLFWDYVSAE
Template Known Secondary structure  TTTTSTTS


S


TTTS
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   349350.........360.........370.........380.........390.........400.........410.........420........
 
   388.390.........400.........410.. .......420.........430. ........440.........450.........460.
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Query Sequence  HGIHMHAPEEGLRMLGTAMDKAADA. . . RTKLARLLATKGITHEIQI. . . PDISTKEKAQQAIGLNMEQIKAEKQDFIKT
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Template Sequence  NSVGFHNPAKALDTLMTSMECSQKAVDLATEATDFGIAPALAGDIKKLVPPILTLSRKLQ. . . . QDPEFLKQNPWTRLLP
Template Known Secondary structure  TTTTTT
TTTTTTGGGSS
S






TTGG....G
TTSTTGGGS
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   429430.........440.........450.........460.........470.........480........ .490.........500....
 
   462.......470.....
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Query Sequence  VIPQWEEQARKNGL
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Template Conservation                
Template Sequence  ALPKAEQVWEGQDR
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TT
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   505....510........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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