Job Description P0ABK9 Confidence 97.45% Date Thu Jan 5 11:15:44 GMT 2012 Rank 18 Aligned Residues 207 % Identity 18% Template c3ov0A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:cytochrome c family protein; PDBTitle: structure of dodecaheme cytochrome c gsu1996 Resolution 3.20 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	K	N	A	E	D	G	P	L	P	M	A	C	W	S	C	K	S	P	D	V	A	R	L	I	Q	K	D	G	E	D	G	Y	F	H	G	K	W	A	R	G	G	P	E	I	V	N	N	L	G	C	A	D	C	H	N	T	A	S	P	E	F	A	K	G	K	P	E	L	T	L	S	R	P	Y	A	A	R	A
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		T	G	M	K	A	F	S	V	A	D	D	S	Q	C	V	R	C	H	S	G	S	A	R	P	V	A	Y	R	M	K	G	A	G	E	A	V	F	S	H	E	V	H	V	P	M	L	E	.	.	G	K	C	R	T	C	H	S	N	R	E	I	T	G	G	R	N	V	T	M	A	Q	M	E	K	G	K	S	C	G	A
Template Known Secondary structure		S	S	S	S	S			S			T	T	S	S	T	T	T													T	T								G	G	G	T	S	T	T	T	S	.	.	S		T					T		T	T	T	S			S	S								T	T	S	T	T	T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		189	190	.	.	.	.	.	.	.	.	.	200																														.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	A	I	G	K	P	F	E	K	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	D	Q	Q	S	M	V	C	G	Q	C	H	V	E	Y	Y	F	D	G	K	N	K	A	V	K	F	P	W	D	D	G	M	K	V	E	N	M	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	H	N	D	K	M	A	F	T	V	A	G	N	C	G	K	C	H	K	G	M	T	P	P	K	T	V	N	F	K	M	K	G	V	A	D	A	A	F	S	H	E	F	H	L	G	M	Y	K	C	N	E	C	H	T	K	L	F	A	Y	K	A	G	A	K	R	F	T	M	A	D	M	D	K	G	K	S	C	G	A
Template Known Secondary structure		T	B	T	T	S	S	B			S	S	S						B	S	S					S							S	S	S												T	T			G	G	G	S	T	T	T	S			S	S	S		S									T	T	T		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		240	.	.	.	.	.	.	.	.						.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		Q	Y	Y	D	K	I	A	F	S	.	.	.	.	.	D	W	T	N	S	L	S	K	T	P	M	L	K	A	Q	H	P	E	Y	E	T	W	T	A	G	I	H	G	K	N	N	V	T	C	I	D	C	H	M	P	K	V	Q	N	A	E	G	K	L	Y	T	D	H	K	I	G	N	P	F	D	N	F	A	Q	T	C
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.																																															.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		C	H	N	G	K	D	A	F	S	S	A	S	D	C	G	K	C	H	P	G	L	K	P	A	K	L	T	Y	K	T	S	V	G	E	A	Y	F	D	H	D	I	H	L	S	M	F	K	C	A	D	C	H	T	K	V	F	K	Y	R	K	.	.	.	.	G	S	A	P	A	T	M	A	D	M	E	K	G	K	S	C
Template Known Secondary structure		T	B	T	T	T	S	B	S		S	S	S		T	T	T	T	S	S	S											T	T											T	T	T			T	T	T	S	T	T	T	S			S	S	S	.	.	.	.							T	T					T		G	G
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		315	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	C	H	T	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	C	H	N	G	K
Template Known Secondary structure		G	G	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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