Job Description P0ABK9 Confidence 94.52% Date Thu Jan 5 11:15:44 GMT 2012 Rank 38 Aligned Residues 139 % Identity 19% Template c2cvcA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:high-molecular-weight cytochrome c precursor; PDBTitle: crystal structure of high-molecular weight cytochrome c2 from desulfovibrio vulgaris (hildenborough) Resolution 2.00 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	L	G	C	A	D	C	H	N	T	A	S	P	E	F	A	K	G	K	P	E	L	T	L	S	R	P	Y	A	A	R	A	M	E	A	I	G	K	P	F	E	K	A	G	R	F	D	Q	Q	S	M	V	C	G	Q	C	H	V	E	Y	Y	F	D	G	K	N	K	A	V	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	K	D	C	A	A	C	H	K	S	K	D	G	K	M	S	L	K	F	M	R	L	D	D	N	S	A	A	E	L	K	E	I	Y	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	I	G	C	H	T	D	L	A	K	A	G	K	K	T	G	P	Q	D	G	E	C	R	S	C	H	N
Template Known Secondary structure		T	T			G	G	G	T					T	T				S	S	S	S		S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T							T	T						S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
						226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.	.	.																																																						.
Query SS confidence		.	.	.	.																																																						.
Query Sequence		.	.	.	.	K	F	P	W	D	D	G	M	K	V	E	N	M	E	Q	Y	Y	D	K	I	A	F	S	D	W	T	N	S	L	S	K	T	P	M	L	K	A	Q	H	P	E	Y	E	T	W	T	A	G	I	H	G	K	N	.	N	V	T	C	I	D	C	H	M	P	K	V	Q	N	A	E	G	K	L	Y	T	D
Query Conservation		.	.	.	.																																																						.
Alig confidence		.	.	.	.																																																						.																.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		P	K	P	S	A	A	S	S	W	K	E	I	G	F	D	K	S	L	H	Y	R	H	V	A	S	K	A	I	K	P	V	G	D	P	Q	K	N	C	G	A	C	H	H	V	Y	D	E	A	S	K	K	L	V	W	G	K	N	K	E	D	S	C	R	A	C	H	G	E	K	P	V	D	K	.	.	.	.	.	.	.
Template Known Secondary structure		S	S		S	S																			T		T	T	S				S	S	S	S			G	G	G	T						T	T	T	T						T	T					G	G	G	T			S	S		B	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	I	G	N	P	F	D	N	F	A	Q	T	C	A	N	C	H
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	R	P	A	L	D	T	A	A	H	T	A	C	I	S	C	H
Template Known Secondary structure		.	.	B
Template Predicted Secondary structure		.	.
Template SS confidence
				214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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