Job Description P0ABK9 Confidence 95.64% Date Thu Jan 5 11:15:44 GMT 2012 Rank 32 Aligned Residues 77 % Identity 25% Template c2bq4A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:basic cytochrome c3; PDBTitle: crystal structure of type i cytochrome c3 from2 desulfovibrio africanus Resolution 1.68 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	C	A	D	C	H	N	T	A	S	P	E	F	A	K	G	K	P	E	L	T	L	S	R	P	Y	A	A	R	A	M	E	A	I	G	K	P	F	E	K	A	G	R	F	D	Q	Q	S	M	V	C	G	Q	C	H	V	E	Y	Y	F	D	G	K	N	K	A	V	K	F	P	W	D	D	G	M	K	V	E	N
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	C	Q	K	C	H	H	K	W	D	G	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	G	G	C	A	T	E	G	C	H	A	D	T	T	S	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S	T	T			S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	T	T	S	S		B						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.																																.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	Q	Y	Y	D	K	I	A	F	S	D	W	T	N	S	L	S	K	T	P	M	L	K	A	Q	H	P	E	Y	E	T	W	T	A	G	I	H	G	K	N	N	V	T	C	I	D	C	H	M	P	K	V	Q	N	A	E	G	K	L	Y	T	D	H	K	I	G	N	P	F	D	N	F	A	Q	T	C	A	N	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	K	D	P	K	F	L	M	T	A	F	H	S	K	S	P	M	S	C	Q	G	C	H	K	E	M	K	T	A	K	K	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	A	C	A	Q	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	B							S	S	S	T	T	S									G	G	G	T		S			.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.														.	.	.	.	110	.	.
		318	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		113	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions