Job Description P0ABK9 Confidence 95.19% Date Thu Jan 5 11:15:44 GMT 2012 Rank 35 Aligned Residues 186 % Identity 18% Template c1z1nX_ PDB info PDB header:electron transport Chain: X: PDB Molecule:sixteen heme cytochrome; PDBTitle: crystal structure of the sixteen heme cytochrome from desulfovibrio2 gigas Resolution 2.10 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		P	R	G	H	A	F	A	V	T	D	V	R	E	T	L	R	T	G	A	P	K	N	A	E	.	.	.	.	.	.	.	.	D	G	P	L	P	M	A	C	W	S	C	K	S	P	D	V	A	R	L	I	Q	K	D	G	E	D	G	Y	F	H	G	K	W	A	R	G	G	P	E	I	V	N	N	L	G	C	A	D
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																.	.																										.
Template Conservation																																																	.	.																										.
Template Sequence		P	K	V	D	A	I	V	I	D	T	A	A	V	F	G	K	L	E	Q	P	G	V	V	F	Y	H	E	K	H	T	T	A	L	E	K	M	A	K	D	C	T	S	C	H	V	E	T	.	.	E	G	K	L	S	F	K	F	A	R	T	V	D	P	T	S	K	N	A	M	A	E	Q	Y	H	.	A	N	C	M	A
Template Known Secondary structure				T	T						G	G	G	G	G	S	S		S	S			B														T	T			G	G	G	T	S				.	.	T	T					S	S	S		S	S			S	S										.
Template Predicted Secondary structure																																																	.	.																										.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	N	T	A	S	P	E	F	A	K	G	K	P	E	L	T	L	S	R	P	Y	A	A	R	A	M	E	A	I	G	K	P	F	E	K	A	G	R	F	D	Q	Q	S	M	V	C	G	Q	C	H	V	E	Y	Y	F	D	G	K	N	K	A	V	K	F	P	W	D	D	G	M	K	V	E	N	M	E	Q	Y	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		C	H	E	K	V	V	G	S	Y	P	T	A	P	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	C	K	R	C	H	V	G	P	G	V	E	G	A	T	.	.	.	.	.	.	V	T	P	K	P	S	L	D	L	N	L	H	G	R
Template Known Secondary structure					T	T	T	T	T		T	T	S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						B							G	G	G	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.																														.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		D	K	I	A	F	S	D	W	T	N	S	L	S	K	T	P	M	L	K	A	Q	H	P	E	Y	E	T	W	T	A	G	I	H	G	K	N	.	N	V	T	C	I	D	C	H	M	P	K	V	Q	N	A	E	G	K	L	Y	T	D	H	K	I	G	N	P	F	D	N	F	A	Q	T	C	A	N	C	H
Query Conservation																																						.
Alig confidence																																						.																	.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		H	V	V	A	E	A	K	R	L	Q	V	K	E	D	E	S	C	K	A	C	H	H	T	Y	D	E	A	Q	K	K	L	V	Y	A	K	G	E	E	G	S	C	V	Y	C	H	K	Q	E	P	L	P	S	P	.	.	.	.	V	D	R	V	V	P	S	T	R	D	A	S	H	E	S	C	V	N	C	H
Template Known Secondary structure										T	T	S		G	G	G	S	G	G	G	T						G	G	G	S	S					T	T					G	G	G	T	S		S	S			B			.	.	.	.				B
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions