Job Description P0ABK9 Confidence 95.94% Date Thu Jan 5 11:15:44 GMT 2012 Rank 28 Aligned Residues 174 % Identity 16% Template c1eysC_ PDB info PDB header:electron transport Chain: C: PDB Molecule:photosynthetic reaction center; PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum Resolution 2.20 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																				.	.	.	.																																										.	.															.
Query SS confidence																				.	.	.	.																																										.	.															.
Query Sequence		G	Y	F	H	G	K	W	A	R	G	G	P	E	I	V	N	N	L	.	.	.	.	G	C	A	D	C	H	N	T	A	S	P	E	F	A	K	G	K	P	E	L	T	L	S	R	P	Y	A	A	R	A	M	E	A	I	G	K	P	F	E	K	A	.	.	G	R	F	D	Q	Q	S	M	V	C	G	Q	C	H	.
Query Conservation																				.	.	.	.																																										.	.															.
Alig confidence																				.	.	.	.																				.	.	.	.	.	.																	.	.															.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		D	L	S	V	G	E	F	T	R	T	M	V	A	V	T	T	W	V	S	P	K	E	G	C	N	Y	C	H	V	P	G	N	W	A	S	D	D	I	Y	T	K	.	.	.	.	.	.	V	V	S	R	R	M	F	E	L	V	R	A	A	N	S	D	W	K	A	H	V	A	E	T	G	V	T	C	Y	T	C	H	R
Template Known Secondary structure		T	S	B																	T	T	T		G	G	G	S	S	B	T	T	B	T	T				S				.	.	.	.	.	.																						T	T	T									T
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
								214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	V	E	Y	Y	F	D	G	K	N	K	A	V	K	F	P	W	D	D	G	M	K	V	E	N	M	E	Q	Y	Y	D	K	I	A	F	S	D	W	T	N	S	L	S	K	T	P	M	L	K	A	Q	H	P	E	Y	E	T	W	T	A	G	I	H	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	P	V	P	K	Y	A	W	V	T	D	P	G	P	K	Y	P	S	G	L	K	P	T	G	Q	N	Y	G	S	K	T	V	A	Y	A	S	L	P	F	D	P	L	T	P	F	L	D	Q	A	N	E	I	R	I	T	G	N	A	A	L	A	G	S	N	P	A	S	L	K	Q	A	E	W	T	F	G	L	M	M
Template Known Secondary structure		T		S	S		T	T		B						S	S				S			S		T	T	S			S	G	G	G	G	G	G	G	S				S	S					T	S									S	S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
						277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.														.	.	.	.	.	310														.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure		.	.	.	.																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	K	N	N	V	T	C	I	D	C	H	M	P	K	V	Q	N	A	.	.	E	G	K	L	Y	T	D	H	K	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	F	D	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	T	C	A	N	C	H	T	Q
Query Conservation		.	.	.	.																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	S	D	S	L	G	V	G	C	T	S	C	H	N	T	R	A	F	N	D	W	T	Q	S	T	P	K	R	T	T	A	W	Y	A	I	R	H	V	R	D	I	N	Q	N	Y	I	W	P	L	N	D	V	L	P	A	S	R	K	G	P	Y	G	D	P	L	R	V	S	C	M	T	C	H	Q	A
Template Known Secondary structure								T			G	G	G	T			T	T		T	T		T	T	S	S																					T	T	G	G	G	G	G	T	S		G	G	G	B		T	T	S		B		B								T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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