Job Description P60844 Confidence 100.00% Date Thu Jan 5 12:07:12 GMT 2012 Rank 12 Aligned Residues 218 % Identity 36% Template c3d9sB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:aquaporin-5; PDBTitle: human aquaporin 5 (aqp5) - high resolution x-ray structure Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	R	K	L	A	A	E	C	F	G	T	F	W	L	V	F	G	G	C	G	S	A	V	L	A	A	G	F	P	E	L	G	I	G	F	A	G	V	A	L	A	F	G	L	T	V	L	T	M	A	F	A	V	G	H	I	S	G	G	H	F	N	P	A	V	T	I	G	L	W	A	G	G	R	F	P	A	K	E
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		F	L	K	A	V	F	A	E	F	L	A	T	L	I	F	V	F	F	G	L	G	S	A	L	.	.	.	K	W	P	S	A	L	P	T	I	L	Q	I	A	L	A	F	G	L	A	I	G	T	L	A	Q	A	L	G	P	V	S	G	G	H	I	N	P	A	I	T	L	A	L	L	V	G	N	Q	I	S	L	L	R
Template Known Secondary structure																							T	T	S	.	.	.			T	T	S																																									T	T		S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	Y	V	I	A	Q	V	V	G	G	I	V	A	A	A	L	L	Y	L	I	A	S	G	K	T	G	F	D	A	A	A	S	G	F	A	S	N	G	Y	G	E	H	S	P	G	G	Y	S	M	L	S	A	L	V	V	E	L	V	L	S	A	G	F	L	L	V	I	H	G	A	T	D	K	F	A	P	A	G
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	F	Y	V	A	A	Q	L	V	G	A	I	A	G	A	G	I	L	Y	G	V	A	P	L	N	A	R	G	N	L	.	.	.	.	.	.	.	.	.	A	V	N	A	L	N	N	N	T	T	Q	G	Q	A	M	V	V	E	L	I	L	T	F	Q	L	A	L	C	I	F	A	S	T	D	S	R	R	T	S	P
Template Known Secondary structure																								S						T	T	T	.	.	.	.	.	.	.	.	.	T						T	T	S																								T		S	S			S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.										.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		161			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		F	.	.	A	P	I	A	I	G	L	A	L	T	L	I	H	L	I	S	I	P	V	T	N	T	S	V	N	P	A	R	S	T	A	V	A	I	F	Q	G	G	W	A	L	E	Q	L	W	F	F	W	V	V	P	I	V	G	G	I	I	G	G	L	I	Y	R	T	L	L	E	K	R	D
Query Conservation			.	.
Alig confidence			.	.																																								.
Template Conservation																																												.
Template Sequence		V	G	S	P	A	L	S	I	G	L	S	V	T	L	G	H	L	V	G	I	Y	F	T	G	C	S	M	N	P	A	R	S	F	G	P	A	V	V	M	N	R	F	.	S	P	A	H	W	V	F	W	V	G	P	I	V	G	A	V	L	A	A	I	L	Y	F	Y	L	L	F	P	N	S
Template Known Secondary structure																									S			S	S											T	T			.		T	T	T	T																			T	T	T	S
Template Predicted Secondary structure																																												.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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