Return to main results Retrieve Phyre Job Id

Job DescriptionP33595
Confidence85.97%DateThu Jan 5 11:52:20 GMT 2012
Rank178Aligned Residues62
% Identity15%Templated2g9wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.... .....40.........50.........60.........70.........80.......
Predicted Secondary structure 


....















Query SS confidence 














. . . .




















































Query Sequence  KSQDTTLNELAALLS. . . . CSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQ
Query Conservation        
 


  
 ....

 

    
      


 
 
  


  
 
                    
Alig confidence 














....



















......


























Template Conservation       
  

 
 
        


 
 
 

  

 
 ...... 

   
   
             
  
Template Sequence  RTEPQTVRQVHEALSARRDLAYTTVXAVLQRLAKKNLVL. . . . . . QIRAHRYAPVHGRDELVAGLXVDALAQ
Template Known Secondary structure 
SS
TTT



TTS......


SS
TT
Template Predicted Secondary structure 













......



Template SS confidence 







































































   21........30.........40.........50......... 60.........70.........80......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions