Job Description P33595 Confidence 82.56% Date Thu Jan 5 11:52:20 GMT 2012 Rank 198 Aligned Residues 80 % Identity 15% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	.	.	.	.	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	W	E	A	E	V	G	R	G	K	R	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q	R	A	E	D	L	L
Query Conservation																										.	.	.	.
Alig confidence									.	.	.	.	.													.	.	.	.																									.	.	.
Template Conservation									.	.	.	.	.																																									.	.	.
Template Sequence		X	N	I	I	W	D	K	.	.	.	.	.	K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	.	.	.	S	E	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X	K	T	A	K	T	F	L
Template Known Secondary structure								S	.	.	.	.	.	S	S												T	T	S																	T	T	S						.	.	.		T	T								S
Template Predicted Secondary structure									.	.	.	.	.																																									.	.	.
Template SS confidence
		16	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		86				.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		E	.	.	.	Q	D	R	I	D	Q	L	V	Q	L	V
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		N	K	L	Y	G	G	D	X	K	S	L	V	L	N	F
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions