Job Description P33595 Confidence 84.63% Date Thu Jan 5 11:52:20 GMT 2012 Rank 188 Aligned Residues 97 % Identity 15% Template c3mklB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:hth-type transcriptional regulator gadx; PDBTitle: crystal structure of dna-binding transcriptional dual regulator from2 escherichia coli k-12 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	S	A	R	L	Q	Q	Q	F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	W	E	A	E	V	G	R	G	K	R	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q	R
Query Conservation
Alig confidence																		.	.																														.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																														.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	Q	P	N	X	R	T	R	V	C	T	V	I	N	N	.	.	N	I	A	H	E	W	T	L	A	R	I	A	S	E	L	L	X	S	P	S	L	L	K	K	K	L	R	E	E	.	.	.	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	Y	S	Q	L	L	T	E	C	R	X	Q	R
Template Known Secondary structure			S	S														.	.	S	T	T	S												T	S												T	.	.	.	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																														.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.																.	.	.	.	.	.	190	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure											.	.										.	.
Query SS confidence											.	.										.	.
Query Sequence		A	E	D	L	L	E	Q	D	R	.	.	I	D	Q	L	V	Q	L	V	G	.	.	D	K	A	T	V	R	Q	M	L	V	S	H	L	G	R	S	F	R	Q
Query Conservation											.	.										.	.
Alig confidence											.	.										.	.
Template Conservation
Template Sequence		A	L	Q	L	I	V	I	H	G	F	S	I	K	R	V	A	V	S	C	G	Y	H	S	V	S	Y	F	I	Y	V	F	R	N	Y	Y	G	X	T	P	T	E
Template Known Secondary structure						T	T	S	T	T										T	T		S														S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions