 |
Job Description | P33595 | Confidence | 21.54% | Date | Thu Jan 5 11:52:20 GMT 2012 |
Rank | 371 | Aligned Residues | 46 |
% Identity | 22% | Template | c3majA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:dna processing chain a; |
PDBTitle: crystal structure of putative dna processing protein dpra from2 rhodopseudomonas palustris cga009
|
Resolution | 2.05 Å |
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | L | W | Q | C | C | E | G | K | S | Q | D | T | T | L | N | E | L | A | A | L | L | S | C | S | R | R | H | M | R | T | L | L | N | T | M | Q | D | R | G | W | L | T | W | E | A | E |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   | . | . |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
|
Template Sequence |   |
T | R | I | L | A | L | L | G | P | S | . |
. |
P | V | G | I | D | D | L | I | R | L | S | G | I | S | P | A | V | V | R | T | I | L | L | E | L | E | L | A | G | R | L | E | R | H | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| S | S | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
329 | 330 | . | . | . | . | . | . | . | . | |
|
. | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|