Job Description P33595 Confidence 88.80% Date Thu Jan 5 11:52:20 GMT 2012 Rank 164 Aligned Residues 75 % Identity 19% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	S	A	R	L	Q	Q	Q	F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	W	E	A	E	V	G	R	G	K	R	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q	R
Query Conservation
Alig confidence															.	.	.	.	.	.																																				.	.	.
Template Conservation															.	.	.	.	.	.																																				.	.	.
Template Sequence		X	A	N	E	R	R	L	Q	I	L	C	X	L	.	.	.	.	.	.	H	N	Q	E	L	S	V	G	E	L	C	A	K	L	Q	L	S	Q	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	.	.	.	T	R	K	E	A	Q	T	V	Y	Y	T	L	K	S	E	E	V	K	A	X	I	K	L
Template Known Secondary structure				S										T	.	.	.	.	.	.	T	T	S												T																T	T	S			.	.	.					T	T
Template Predicted Secondary structure															.	.	.	.	.	.																																				.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		81	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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