Job Description P33595 Confidence 89.89% Date Thu Jan 5 11:52:20 GMT 2012 Rank 158 Aligned Residues 96 % Identity 13% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	A	R	L	Q	Q	Q	F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	W	E	A	E	V	G	R	G	K	R	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q	R	A
Query Conservation
Alig confidence																	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template Conservation																	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template Sequence		D	D	L	D	A	M	E	K	I	S	C	L	V	K	S	.	.	D	I	T	R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	.	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S	Y	S
Template Known Secondary structure			T	T													.	.	T	T	T	S												T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	.	T	T
Template Predicted Secondary structure																	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																		.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		82	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure										.	.										.	.
Query SS confidence										.	.										.	.
Query Sequence		E	D	L	L	E	Q	D	R	.	.	I	D	Q	L	V	Q	L	V	G	.	.	D	K	A	T	V	R	Q	M	L	V	S	H	L	G	R	S	F	R	Q
Query Conservation										.	.										.	.
Alig confidence										.	.										.	.
Template Conservation
Template Sequence		I	S	L	M	K	T	G	E	F	K	I	K	Q	I	A	Y	Q	S	G	F	A	S	V	S	Y	F	S	T	V	F	K	S	T	M	N	V	A	P	S	E
Template Known Secondary structure								T											T	T		S														S	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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