Job Description P33595 Confidence 91.59% Date Thu Jan 5 11:52:20 GMT 2012 Rank 142 Aligned Residues 76 % Identity 16% Template c3cuoB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	S	A	R	L	Q	Q	Q	F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	W	E	A	E	V	G	R	G	K	R	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q	R
Query Conservation
Alig confidence																		.	.	.	.	.																																		.	.	.
Template Conservation																		.	.	.	.	.																																		.	.	.
Template Sequence		M	S	H	P	K	R	L	L	I	L	C	M	L	S	G	S	.	.	.	.	.	P	G	T	S	A	G	E	L	T	R	I	T	G	L	S	A	S	A	T	S	Q	H	L	A	R	M	R	D	E	G	L	I	D	.	.	.	S	Q	R	D	A	Q	R	I	L	Y	S	I	K	N	E	A	V	N	A	I	I	A	T
Template Known Secondary structure		T		S											T	T		.	.	.	.	.	S																													T	S			.	.	.					S	S
Template Predicted Secondary structure																		.	.	.	.	.																																		.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		81	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	N	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions