Return to main results Retrieve Phyre Job Id

Job DescriptionP33595
Confidence94.22%DateThu Jan 5 11:52:20 GMT 2012
Rank105Aligned Residues99
% Identity8%Templatec2qwwB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of multiple antibiotic-resistance repressor (marr)2 (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a3 resolution
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  QQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLE
Query Conservation     
  
            
 


  
 

 

    
      


 
 
  


  
 
                   
Alig confidence 









..










































...





















Template Conservation    
   
  
..      
   

  
 
   


  
  
  

 
 
     
... 

 

  
             
Template Sequence  IQQLAXINVI. . YSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTXD. . . LTLKLSKKGEDLSKRSTANAFX
Template Known Secondary structure  ..STTT

TTSS




...

S
Template Predicted Secondary structure  ..










...





Template SS confidence 















































































   40......... 50.........60.........70.........80.........90.. .......100.........110....
 
   87..90........ .100.........110
Predicted Secondary structure 




..
Query SS confidence 











. .











Query Sequence  QDRIDQLVQLVG. . DKATVRQMLVSH
Query Conservation   
    
  

 ..        
   
Alig confidence 











..











Template Conservation            

 

   
  

 

Template Sequence  YKAXXKVFENLTENEIEELIRLNKKV
Template Known Secondary structure  TS
Template Predicted Secondary structure 



Template SS confidence 

























   120.........130.........140.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions