Job Description P33595 Confidence 56.93% Date Thu Jan 5 11:52:20 GMT 2012 Rank 251 Aligned Residues 112 % Identity 14% Template c2plyB_ PDB info PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	L	Q	Q	Q	F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	W	E	A	E	V	G	R	G	K	R	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q	R	A	E	D
Query Conservation
Alig confidence															.	.																																										.	.	.	.	.	.	.
Template Conservation															.	.																																										.	.	.	.	.	.	.
Template Sequence		K	K	L	L	K	D	L	E	D	K	Y	R	V	.	.	S	R	W	Q	P	P	W	V	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	N	D	E	.	.	.	.	.	.	.	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N
Template Known Secondary structure															.	.		T	T	S											T	T																	T	S				S	S	S	S	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																																										.	.	.	.	.	.	.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.			.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.								570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
		84	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure							.	.																								.	.	.
Query SS confidence							.	.																								.	.	.
Query Sequence		L	L	E	Q	D	.	.	R	I	D	Q	L	V	Q	L	V	G	D	K	A	T	V	R	Q	M	L	V	S	H	L	.	.	.	G	R	S	F	R	Q	G	R	H	I	L	R	V
Query Conservation							.	.																								.	.	.
Alig confidence							.	.																								.	.	.
Template Conservation
Template Sequence		L	A	S	T	G	P	F	G	L	A	E	A	R	D	A	L	G	S	S	R	K	Y	V	L	P	L	L	E	Y	L	D	Q	V	K	F	T	R	R	V	G	D	K	R	V	V	V
Template Known Secondary structure				T	T	S		B										T																T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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