Job Description P33595 Confidence 59.56% Date Thu Jan 5 11:52:20 GMT 2012 Rank 242 Aligned Residues 108 % Identity 14% Template c2pjpA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Q	F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	W	E	A	E	V	G	R	G	K	R	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q	R	A	E	D	L	L	E
Query Conservation
Alig confidence																	.	.																																					.	.	.	.	.	.	.
Template Conservation																	.	.																																					.	.	.	.	.	.	.
Template Sequence		Q	A	I	W	Q	K	A	E	P	L	F	G	D	E	P	.	.	W	W	V	R	D	L	A	K	E	T	G	T	D	E	Q	A	M	R	L	T	L	R	Q	A	A	Q	Q	G	I	I	T	A	I	V	K	D	.	.	.	.	.	.	.	R	Y	Y	R	N	D	R	I	V	E	F	A	N	M	I	R	D	L	D	Q
Template Known Secondary structure									G	G	G		S	S	S		.	.										T	T																T	T	S						T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																																					.	.	.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.			.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.								.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		87	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure				.	.	.																								.	.	.
Query SS confidence				.	.	.																								.	.	.
Query Sequence		Q	D	.	.	.	R	I	D	Q	L	V	Q	L	V	G	D	K	A	T	V	R	Q	M	L	V	S	H	L	.	.	.	G	R	S	F	R	Q	G	R	H	I	L	R
Query Conservation				.	.	.																								.	.	.
Alig confidence				.	.	.																								.	.	.
Template Conservation
Template Sequence		E	C	G	S	T	C	A	A	D	F	R	D	R	L	G	V	G	R	K	L	A	I	Q	I	L	E	Y	F	D	R	I	G	F	T	R	R	R	G	N	D	H	L	L
Template Known Secondary structure				S	S											T	S																T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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