Job Description P33595 Confidence 66.48% Date Thu Jan 5 11:52:20 GMT 2012 Rank 232 Aligned Residues 76 % Identity 14% Template c2dbbA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 Resolution 2.00 Å

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Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.											.	.	.	.
Query SS confidence																																																				.											.	.	.	.
Query Sequence		R	L	Q	Q	Q	F	I	R	L	W	Q	C	C	E	G	K	S	Q	D	T	T	L	N	E	L	A	A	L	L	S	C	S	R	R	H	M	R	T	L	L	N	T	M	Q	D	R	G	W	L	T	.	W	E	A	E	V	G	R	G	K	R	.	.	.	.	S	R	L	T	F	L	Y	T	G	L	A	L	Q	Q	Q
Query Conservation																																																				.											.	.	.	.
Alig confidence														.	.	.	.																																			.											.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		R	V	D	M	Q	L	V	K	I	L	S	E	.	.	.	.	N	S	R	L	T	Y	R	E	L	A	D	I	L	N	T	T	R	Q	R	I	A	R	R	I	D	K	L	K	K	L	G	I	I	R	K	F	T	I	I	P	D	I	D	K	L	G	Y	M	Y	A	I	V	L	I	K	S	K	V	P	S	D	A	D	K
Template Known Secondary structure														.	.	.	.		T	T										T	T	S																T	S	S									T	G	G	G	T											S	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	S	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions