Return to main results Retrieve Phyre Job Id

Job DescriptionP33595
Confidence21.70%DateThu Jan 5 11:52:20 GMT 2012
Rank368Aligned Residues31
% Identity16%Templatec1u5tB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; PDBTitle: structure of the escrt-ii endosomal trafficking complex
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50....
Predicted Secondary structure 





Query SS confidence 






























Query Sequence  TTLNELAALLSCSRRHMRTLLNTMQDRGWLT
Query Conservation    
 


  
 

 

    
      


 
Alig confidence 






























Template Conservation   
   
     

   
 
 
   
  
 
 
Template Sequence  QILSSNNSKSNWTLGILMEVLQNCVDEGDLL
Template Known Secondary structure  TS
TT



TS
Template Predicted Secondary structure 







Template SS confidence 






























   516...520.........530.........540......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions