Return to main results Retrieve Phyre Job Id

Job DescriptionP33595
Confidence30.48%DateThu Jan 5 11:52:20 GMT 2012
Rank320Aligned Residues47
% Identity17%Templatec1dpuA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain; PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30... ......40.........50...
Predicted Secondary structure 




.





Query SS confidence 



























.



















Query Sequence  LQQQFIRLWQCCEGKSQDTTLNELAALL. SCSRRHMRTLLNTMQDRGWL
Query Conservation      
  
            
 


  
. 

 

    
      


Alig confidence 












.













.



















Template Conservation   
  

  
 
  .   

 
 

   
       
  


 
  

 
Template Sequence  AQNQVLNLIKACP. RPEGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHI
Template Known Secondary structure 

.
TTTSTTS
TTS
Template Predicted Secondary structure 

.












Template SS confidence 
















































   208.210.........220 .........230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions