 |
| Job Description | Q79CP2 | | Confidence | 2.24% | Date | Thu Jan 5 12:37:37 GMT 2012 |
| Rank | 58 | Aligned Residues | 25 |
| % Identity | 20% | Template | c1b34B_ |
| PDB info |
PDB header:rna binding protein | Chain: B: PDB Molecule:protein (small nuclear ribonucleoprotein sm d2); |
PDBTitle: crystal structure of the d1d2 sub-complex from the human snrnp core2 domain
|
| Resolution | 2.50 Å |
|
| | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | |  |
|
|
| | | | | |
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | F | R | P | A | I | L | Y | S | D | G | Y | L | P | L | V | P | E | D | K | N | E | T | D | K |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
|
|
| |
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
| |
| | |
|
| | |
|
|
|
|
| |
| | |
| | | |
| Template Sequence | |
K | L | L | G | R | V | K | A | F | D | R | H | C | N | M | V | L | E | N | V | K | E | M | D | R |
| Template Known Secondary structure | |
| | | | | | | | |
| T | T |
|
| | | | | | | | |
|
| |
| Template Predicted Secondary structure | |
| | | | | | | | |
|
| | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
