Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEF4
Confidence99.91%DateThu Jan 5 11:23:11 GMT 2012
Rank60Aligned Residues119
% Identity27%Templatec3t6kB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator receiver; PDBTitle: crystal structure of a hypothetical response regulator (caur_3799)2 from chloroflexus aurantiacus j-10-fl at 1.86 a resolution
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70..... ....80.
Predicted Secondary structure 























..





Query SS confidence 







































































. .





Query Sequence  PLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYLPDGRGINLLHELVQA. . HYPGDV
Query Conservation   







       
   
        
  
     

  
    






  

   
   
  

  ..     
Alig confidence 
























..












































..





Template Conservation     





       
   
   
..  
        
         





  
    
      

         
Template Sequence  PHTLLIVDDDDTVAEXLELVLRGAG. . YEVRRAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPI
Template Known Secondary structure 


S
TT..
SSS

SS

SSS
SGGGTT

Template Predicted Secondary structure 






..

























Template SS confidence 















































































   3......10.........20....... ..30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120....
Predicted Secondary structure 












Query SS confidence 










































Query Sequence  VFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQR
Query Conservation 
 

          

  

 


 

     
   
      
Alig confidence 










































Template Conservation 
  
              
    
 

     
   
   
 
Template Sequence  LXLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYRVKNILAR
Template Known Secondary structure 
TT
T
STT


Template Predicted Secondary structure 

















Template SS confidence 










































   81........90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions