Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEF4
Confidence87.92%DateThu Jan 5 11:23:11 GMT 2012
Rank248Aligned Residues116
% Identity12%Templatec3q2kB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca
Resolution2.13 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  APLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVV
Query Conservation    







       
   
        
  
     

  
    






  

   
   
  

       

Alig confidence 














































........









..












Template Conservation 
 


 


 
  
               



 
            ........          .. 

     
 
 
Template Sequence  RKIRFGLVGCGRISKNHIGAIAQHGDRAELVEICDTNPEALQAAEAA. . . . . . . . TGARPFSSLS. . DMLAQGNADALVL
Template Known Secondary structure 



STTTT
TTT
SS........

B

SS..


S
Template Predicted Secondary structure 











........





..





Template SS confidence 















































































   910.........20.........30.........40.........50..... ....60..... ....70........
 
   83......90.........100........ .110.........120........
Predicted Secondary structure 










..


Query SS confidence 

























. .



















Query Sequence  FTTAASDMETVSEAVRCGVFDYLIKP. . IAYERLGQTLTRFRQRKHML
Query Conservation   

          

  

 


 

..     
   
          
Alig confidence 

























..



















Template Conservation   

   
      
   

 

 


 
    
   
   
       
Template Sequence  ATPSGLHPWQAIEVAQAGRHVVSEKPMATRWEDGKRMVKACDEAGVRL
Template Known Secondary structure 
S
GGGTT

SSS
SST

Template Predicted Secondary structure 















Template SS confidence 















































   7980.........90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions