Job Description P0AEF4 Confidence 99.89% Date Thu Jan 5 11:23:11 GMT 2012 Rank 84 Aligned Residues 110 % Identity 19% Template c3m6mF_ PDB info PDB header:lyase/transferase Chain: F: PDB Molecule:sensory/regulatory protein rpfc; PDBTitle: crystal structure of rpff complexed with rec domain of rpfc Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		L	T	L	L	I	V	E	D	E	T	P	L	A	E	M	H	A	E	Y	I	R	H	I	P	G	F	S	Q	I	L	L	A	G	N	L	A	Q	A	R	M	M	I	E	R	F	K	P	G	L	I	L	L	D	N	Y	L	P	D	G	R	G	I	N	L	L	H	E	L	V	.	.	.	.	Q	A	H	Y	P	G	D
Query Conservation																																																																							.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																																										.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		M	R	M	L	V	A	D	D	H	E	A	N	R	M	V	L	Q	R	L	L	K	.	.	.	.	.	.	.	V	L	C	V	N	G	A	E	Q	V	L	D	A	M	A	E	E	D	Y	D	A	V	I	V	D	L	H	M	P	G	M	N	G	L	D	M	L	K	Q	L	R	V	M	Q	A	S	G	M	R	Y	T	P
Template Known Secondary structure									S	S													.	.	.	.	.	.	.					S	S											S			S						S	S		S	S	S															T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.								.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	F	T	T	A	A	S	D	M	E	T	V	S	E	A	V	R	C	G	V	F	D	Y	L	I	K	P	I	A	Y	E	R	L	G	Q	T	L	T	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	L	S	A	D	V	T	P	E	A	I	R	A	C	E	Q	A	G	A	R	A	F	L	A	K	P	V	V	A	A	K	L	L	D	T	L	A	D	L
Template Known Secondary structure							S												T	T	T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions