Job Description P0AEF4 Confidence 71.78% Date Thu Jan 5 11:23:11 GMT 2012 Rank 390 Aligned Residues 98 % Identity 9% Template c3i09A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic branched-chain amino acid-binding protein; PDBTitle: crystal structure of a periplasmic binding protein (bma2936) from2 burkholderia mallei at 1.80 a resolution Resolution 1.80 Å

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		6	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																									.	.	.	.	.	.
Query SS confidence										.	.	.	.																									.	.	.	.	.	.
Query Sequence		T	L	L	I	V	E	D	E	.	.	.	.	T	P	L	A	E	M	H	A	E	Y	I	R	H	I	P	G	F	S	Q	I	L	L	A	G	.	.	.	.	.	.	N	L	A	Q	A	R	M	M	I	E	R	F	K	P	G	L	I	L	L	D	N	Y	L	P	D	G	R	G	I	N	L	L	H	E	L	V	Q	A
Query Conservation										.	.	.	.																									.	.	.	.	.	.
Alig confidence										.	.	.	.															.										.	.	.	.	.	.																				.	.
Template Conservation																												.																																			.	.
Template Sequence		T	W	F	F	L	T	A	D	Y	A	F	G	K	A	L	E	K	N	T	A	D	V	V	K	A	N	.	G	G	K	V	L	G	E	V	R	H	P	L	S	A	S	D	F	S	S	F	L	L	Q	A	Q	S	S	K	A	Q	I	L	G	L	.	.	A	N	A	G	G	D	T	V	N	A	I	K	A	A	K	E	F
Template Known Secondary structure									S	S																	T	.	T											T	T		S												T			S					.	.																	T
Template Predicted Secondary structure																												.																																			.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	P	G	D	V	V	F	T	T	A	A	S	D	M	E	T	V	S	E	A	V	R	C	G	V	F	D	Y	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	T	K	T	X	K	L	A	A	L	L	X	F	I	N	D	V	H	A	L	G	L	E	T	T	Q	G	L	V	L
Template Known Secondary structure		T	G	G	G	T						S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions