Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEF4
Confidence99.92%DateThu Jan 5 11:23:11 GMT 2012
Rank50Aligned Residues122
% Identity20%Templatec3hv2B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator/hd domain protein; PDBTitle: crystal structure of signal receiver domain of hd domain-2 containing protein from pseudomonas fluorescens pf-5
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  APLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVV
Query Conservation    







       
   
        
  
     

  
    






  

   
   
  

       

Alig confidence 

























..



















































Template Conservation     






       
   
   
..  
  
     
   
     
 

 
  

   
      
        

Template Sequence  RRPEILLVDSQEVILQRLQQLLSPLP. . YTLHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRI
Template Known Secondary structure 



S
TTSS..
SSTTS

S
S

SSS

TT
Template Predicted Secondary structure 







..






















Template SS confidence 















































































   11........20.........30...... ...40.........50.........60.........70.........80........
 
   83......90.........100. ........110.........120......
Predicted Secondary structure 







.




Query SS confidence 


















.
























Query Sequence  FTTAASDMETVSEAVRCGV. FDYLIKPIAYERLGQTLTRFRQRKH
Query Conservation   

          

  

. 


 

     
   
        
Alig confidence 


















.
























Template Conservation   

              
     
 

     
   
   
    
Template Sequence  LLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEHQH
Template Known Secondary structure  S


TT

SSS

Template Predicted Secondary structure 













Template SS confidence 












































   8990.........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions