Job Description P0AEF4 Confidence 92.09% Date Thu Jan 5 11:23:11 GMT 2012 Rank 187 Aligned Residues 79 % Identity 13% Template c3cuoB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	M	F	N	A	Y	A	R	G	E	P	K	D	E	L	P	T	G	I	D	P	L	T	L	N	A	V	R	K	L	F	K	E	P	G	V	Q	H	T	A	E	T	V	A	Q	A	L	T	I	S	R	T	T	A	R	R	Y	L	E	Y	C	A	S	R	H	L	I	I	A	E	I	V	H	G	K	V	G	R	P
Query Conservation
Alig confidence																																		.																																							.	.	.	.					.
Template Conservation																																		.																																							.	.	.	.					.
Template Sequence		T	E	L	A	Q	L	Q	A	S	A	E	Q	A	A	A	L	L	K	A	M	S	H	P	K	R	L	L	I	L	C	M	L	.	S	G	S	P	G	T	S	A	G	E	L	T	R	I	T	G	L	S	A	S	A	T	S	Q	H	L	A	R	M	R	D	E	G	L	I	D	S	Q	.	.	.	.	R	D	A	Q	.
Template Known Secondary structure								G	G	G											T		S											.	T	T		S																													T	S					.	.	.	.			S	S	.
Template Predicted Secondary structure																																		.																																							.	.	.	.					.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.
		220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	I	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	L	Y	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions