Job Description P0AEF4 Confidence 99.90% Date Thu Jan 5 11:23:11 GMT 2012 Rank 76 Aligned Residues 130 % Identity 18% Template c2jk1A_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	I	V	E	D	E	T	P	L	A	E	M	H	A	E	Y	I	R	H	I	P	G	F	S	Q	I	L	L	A	G	N	L	A	Q	A	R	M	M	I	E	R	F	K	P	G	L	I	L	L	D	N	Y	L	P	D	G	R	G	I	N	L	L	H	E	L	V	Q	A	H	Y	P	G	D	V	V	F	T	T
Query Conservation
Alig confidence																							.		.	.
Template Conservation																							.		.	.
Template Sequence		A	I	L	L	V	D	D	E	P	H	S	L	A	A	M	K	L	A	L	E	D	.	D	.	.	F	D	V	L	T	A	Q	G	A	E	A	A	I	A	I	L	E	E	E	W	V	Q	V	I	I	C	D	Q	R	M	P	G	R	T	G	V	D	F	L	T	E	V	R	E	R	W	P	E	T	V	R	I	I	I	T
Template Known Secondary structure								S	S												T	T	.	T	.	.	S						S	S											S									S			S	S	S														T	T	S
Template Predicted Secondary structure																							.		.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		A	A	S	D	M	E	T	V	S	E	A	V	.	R	C	G	V	F	D	Y	L	I	K	P	I	A	Y	E	R	L	G	Q	T	L	T	R	F	R	Q	R	K	H	M	L	E	S	I	D	S	A	S	Q	K	Q
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		G	Y	T	D	S	A	S	M	M	A	A	I	N	D	A	G	I	H	Q	F	L	T	K	P	W	H	P	E	Q	L	L	S	S	A	R	N	A	A	R	M	F	T	L	A	R	E	N	E	R	L	S	L	E	M
Template Known Secondary structure		S		T	T											T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions