Job Description P0AEF4 Confidence 94.36% Date Thu Jan 5 11:23:11 GMT 2012 Rank 150 Aligned Residues 81 % Identity 6% Template c1r8jB_ PDB info PDB header:circadian clock protein Chain: B: PDB Molecule:kaia; PDBTitle: crystal structure of circadian clock protein kaia from2 synechococcus elongatus Resolution 2.03 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		M	T	A	P	L	T	L	L	I	V	E	D	E	T	P	L	A	E	M	H	A	E	Y	I	R	H	I	P	G	F	S	Q	I	L	L	A	G	N	L	A	Q	A	R	M	M	I	E	R	F	K	.	.	P	G	L	I	L	L	D	N	Y	L	P	D	G	R	G	I	N	L	L	H	E	L	V	Q	A	H	Y	P
Query Conservation																																																				.	.
Alig confidence																														.	.																					.	.										.	.
Template Conservation																														.	.																																.	.
Template Sequence		V	L	S	Q	I	A	I	C	I	W	V	E	S	T	A	I	L	Q	D	C	Q	R	A	L	S	A	D	R	.	.	Y	Q	L	Q	V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	.	.	N	P	S	F	R	A	V	V	Q	Q	L	C	F	E	G	V	V
Template Known Secondary structure																									T		S	T	T	.	.								S											S	T	T	S		S						T	T	.	.	S	T	T											T	T
Template Predicted Secondary structure																														.	.																																.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		79	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	V	V	F	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	A	I	V	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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