Job Description P69681 Confidence 100.00% Date Thu Jan 5 12:11:47 GMT 2012 Rank 2 Aligned Residues 383 % Identity 96% Template d1u7ga_ SCOP info Ammonium transporter Ammonium transporter Ammonium transporter Resolution 1.40

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	D	K	A	D	N	A	F	M	M	I	C	T	A	L	V	L	F	M	T	I	P	G	I	A	L	F	Y	G	G	L	I	R	G	K	N	V	L	S	M	L	T	Q	V	T	V	T	F	A	L	V	C	I	L	W	V	V	Y	G	Y	S	L	A	F	G	E	G	N	N	F	F	G	N	I	N	W	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	D	K	A	D	N	A	F	X	X	I	C	T	A	L	V	L	F	X	T	I	P	G	I	A	L	F	Y	G	G	L	I	R	G	K	N	V	L	S	X	L	T	Q	V	T	V	T	F	A	L	V	C	I	L	W	V	V	Y	G	Y	S	L	A	S	G	E	G	N	N	F	F	G	N	I	N	W	L	X
Template Known Secondary structure																								T	T								T	T	S																										T							S	S		S	S	S				S	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	N	I	E	L	T	A	V	M	G	S	I	Y	Q	Y	I	H	V	A	F	Q	G	S	F	A	C	I	T	V	G	L	I	V	G	A	L	A	E	R	I	R	F	S	A	V	L	I	F	V	V	V	W	L	T	L	S	Y	I	P	I	A	H	M	V	W	G	G	G	L	L	A	S	H	G	A	L	D	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	N	I	E	L	T	A	V	X	G	S	I	Y	Q	Y	I	H	V	A	F	Q	G	S	F	A	C	I	T	V	G	L	I	V	G	A	L	A	E	R	I	R	F	P	A	V	L	I	F	V	V	V	W	L	T	L	S	Y	I	P	I	A	H	X	V	W	G	G	G	L	L	A	S	H	G	A	L	D	F	A
Template Known Secondary structure		G	T	T			T	T				T	T																										G	G	G	B																T										S	S							T				S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	V	V	H	I	N	A	A	I	A	G	L	V	G	A	Y	L	I	G	K	R	V	G	F	G	K	E	A	F	K	P	H	N	L	P	M	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	F	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	T	V	V	H	I	N	A	A	I	A	G	L	V	G	A	Y	L	I	G	K	R	V	G	F	G	K	E	A	F	K	P	H	N	L	P	X	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	F	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I
Template Known Secondary structure			T	T	T	T															S						T	T		S	S			G	G	G																					G	G	G	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	W	I	F	G	E	W	A	L	R	G	K	P	S	L	L	G	A	C	S	G	A	I	A	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G	V	T	M	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	W	I	F	G	E	W	A	L	R	G	L	P	S	L	L	G	A	C	S	G	A	I	A	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G	V	T	X	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G
Template Known Secondary structure													S	S																		T	T	T	T	T	T	S																													S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	G	C	I	M	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	M	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K	L	A	D	L	T	V	G	L	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	G	C	I	X	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	X	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K	L	A	D	L	T	V	G	L	R	V
Template Known Secondary structure												T	S	G	G	G	T						T	T																																				T		S	B
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions