Job Description P69681 Confidence 4.79% Date Thu Jan 5 12:11:47 GMT 2012 Rank 32 Aligned Residues 74 % Identity 20% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.														.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																													.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	K	P	S	L	L	G	.	.	A	C	S	G	A	I	A	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G
Query Conservation																													.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L	L
Template Known Secondary structure																		S	S	S		S																								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	M	L	K	R	L	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	R	L	A	N	F	L	K
Template Known Secondary structure				T	T					T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions