Job Description Q46892 Confidence 4.48% Date Thu Jan 5 12:35:34 GMT 2012 Rank 15 Aligned Residues 337 % Identity 15% Template d2nwwa1 SCOP info Proton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein Resolution 3.20

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	V	T	I	I	I	G	L	G	A	M	L	G	R	M	I	E	H	S	G	G	A	E	S	L	A	N	Y	F	S	R	K	L	G	D	K	R	T	I	A	A	L	T	L	A	A	F	F	L	G	I	P	V	F	F	D	V	G	F	I	I	L	A	P	I	I	Y	G	F	A	K	V	A	K	I	S	P	L	K
Query Conservation
Alig confidence																																.
Template Conservation																																.
Template Sequence		Q	K	I	L	I	G	L	I	L	G	A	I	V	G	L	I	L	G	H	Y	G	Y	A	H	A	V	H	T	Y	V	.	K	P	F	G	D	L	F	V	R	L	L	K	M	L	V	M	P	I	V	F	A	S	L	V	V	G	A	A	S	I	S	P	A	R	L	G	R	V	G	V	K	I	V	V	Y	Y	L	L	T
Template Known Secondary structure		S																		T	T	T	T					T	T	T	T	.																									T	T	T		S		T	T	T	T
Template Predicted Secondary structure																																.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	L	P	V	A	G	I	M	L	T	V	H	V	A	V	P	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	P	V	A	A	A	G	L	L	H	A	D	I	G	W	L	T	I	I	G	I	A	I	S	I	P	V	G	V	V	G	Y	F	A	A	K	I	I	N	K	R	Q	Y
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		S	A	F	A	V	T	L	G	I	I	M	A	R	L	F	N	P	G	A	G	I	H	L	A	V	G	G	Q	Q	F	Q	P	H	Q	A	P	P	L	V	H	I	L	L	D	I	V	P	T	N	P	F	G	A	L	A	N	G	Q	V	L	P	T	I	F	F	A	I	I	L	G	I	A	I	T	Y	L	M	.	.	.
Template Known Secondary structure																S		S																										G	G	G	S		S								S																					T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	S	V	E	V	L	E	Q	M	Q	L	A	P	A	S	E	E	G	A	T	K	L	S	D	K	I	N	P	P	G	V	A	L	V	T	S	L	I	V	I	P	I	A	I	I	M	A	G	T	V	S	A	T	L	M	P	P	S	H	P	L	L	G	T	L	Q	L	I	G	S	P	M	V	A	L	M	I	A	L
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	N	S	E	N	E	K	V	R	K	S	A	E	T	L	L	D	A	I	N	G	L	A	E	A	M	Y	K	I	V	N	G	V	M	Q	Y	A	P	I	G	V	F	A	L	I	A	Y	V	M	A	E	Q	G	V	H	V	V	G	E	L	A	K	V	T	A	A	V	Y	V	G	L	T	L	Q	I
Template Known Secondary structure		.	.	.	.	.	.	T		S		T	T																											T	T	S																T	G	G	G			T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	F	W	L	L	A	L	R	R	G	W	S	L	Q	H	T	S	D	I	M	G	S	A	L	P	T	A	A	V	V	I	L	V	T	G	A	G	G	V	F	G	K	V	L	V	E	S	G	V	G	K	A	L	A	N	M	L	Q	M	I	D	L	P	L	L	P	A	A	F	I	I	S	L	A	L	R	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	Y	F	V	L	L	K	I	Y	G	I	D	P	I	S	F	I	K	H	A	K	D	A	M	L	T	A	F	V	T	R	S	S	S	G	T	L	P	V	T	M	R	V	A	K	E	M	G	I	S	E	G	I	Y	S	F	T	L	P	L	G	A	T	I	N	M	D	G	T	A	L	Y	Q	G	V	C	T	F
Template Known Secondary structure				T							T	T	T																							T	G	G	G										T	T	T			T	T	T					T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	S	A	T	V	A	I	L	T	T	G	G	L	L	S	E	A	V	M	G	L	N	P	I	Q	C	V	L	V	T	L	A	A	C	F	G	G	L	G	A	S	H	I	N	D	S	G	F	W	I	V	T	K	Y	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	A	N	A	.	.	.	.	.	.	.	.	.	.	.	.	L	G	S	H	L	T	V	G	Q	Q	L	T	I	V	L	T	A	V	L	A	S	I	G	T	A	G	V	P	G	A	G	A	I	M	L	A	M	V	L
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.		T					S	S	T	T													T	T	S	S		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.													.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions