 |
Job Description | Q46892 | Confidence | 2.33% | Date | Thu Jan 5 12:35:34 GMT 2012 |
Rank | 29 | Aligned Residues | 50 |
% Identity | 28% | Template | c3f2eA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:sirv coat protein; |
PDBTitle: crystal structure of yellowstone sirv coat protein c-2 terminus
|
Resolution | 1.67 Å |
|
  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | |
|
|
|
. | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | G | G | V | F | G | K | V | L | V | E | S | G | V | G | K | A | L | A | N | M | L | Q | M | I | D | L | P | L | L | P | A | A | . |
. |
. |
. |
F | I | I | S | L | A | L | R | A | S | Q | G | S | A | T | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |   |
|
|   |   |
|
|   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
Template Sequence |   |
G | F | G | L | K | V | A | R | A | L | N | R | L | G | G | G | P | A | L | V | N | M | I | N | G | L | K | A | Y | Y | I | S | A | F | N | A | N | P | T | V | L | D | A | V | T | D | I | I | T | G | S | P | T | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | S | S | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|