Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI0
Confidence42.89%DateThu Jan 5 11:18:14 GMT 2012
Rank381Aligned Residues65
% Identity18%Templated1j1va_
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like Chromosomal replication initiation factor DnaA C-terminal domain IV
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 













Query SS confidence 







































































Query Sequence  LDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQ
Query Conservation      
     
   
 
 
    
 
   

   

  
   
      
  

   

     
 
 

  
Alig confidence 












.......



















































Template Conservation 
  

  
 
   ....... 
 
  
   
  

 




 
     

  

  

 





  
  

Template Sequence  QKTVAEYYKIKVA. . . . . . . DLLSKRRSRSVARPRQXAXALAKELTNHSLPEIGDAFGGRDHTTVLHACRKI
Template Known Secondary structure  TT

.......S



S


TTS

Template Predicted Secondary structure 


.......











Template SS confidence 







































































   380.........390.. .......400.........410.........420.........430.........440....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions