Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI0
Confidence100.00%DateThu Jan 5 11:18:14 GMT 2012
Rank2Aligned Residues164
% Identity100%Templated1d5ya3
SCOP infoProbable bacterial effector-binding domain Probable bacterial effector-binding domain Rob transcription factor, C-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170.........180.........190.........200.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  EFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTA
Query Conservation          

      
 

                                            
               
Alig confidence 















































































Template Conservation     

  


 

   



    
                

  
                              
   
Template Sequence  EFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTA
Template Known Secondary structure 











GGG
SS

S

SSSTT
Template Predicted Secondary structure 
































Template SS confidence 















































































   122.......130.........140.........150.........160.........170.........180.........190.........200.
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRPINLRC
Query Conservation 
                

 
 



   
    
      

  


 


     
 

 
    
            
Alig confidence 




































































....






Template Conservation           
 
     

 
 



   
           

  


          
 
 
      ....       
Template Sequence  LAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDD. . . . RPINLRC
Template Known Secondary structure  GGG
TT


GGGTTT

SS

GGG

....
S
Template Predicted Secondary structure 
































....


Template SS confidence 















































































   202.......210.........220.........230.........240.........250.........260.........270 .......
 
   282.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  ELLIPIRR
Query Conservation 







Alig confidence 







Template Conservation 

 



 
Template Sequence  ELLIPIRR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   282.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions