Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI0
Confidence99.45%DateThu Jan 5 11:18:14 GMT 2012
Rank17Aligned Residues62
% Identity37%Templated1bl0a2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100.........110........
Predicted Secondary structure 























Query SS confidence 





























































Query Sequence  RRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPL
Query Conservation   

  
   
      
  

   

     
 
 

   
 

   
              
Alig confidence 





























































Template Conservation 


  
  

  
  

  

   

     
 
 

   
 

  

            

Template Sequence  RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPL
Template Known Secondary structure 




TT
S
SS
T
SS

STT




Template Predicted Secondary structure 

















Template SS confidence 





























































   63......70.........80.........90.........100.........110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions