Job Description P0ACI0 Confidence 45.86% Date Thu Jan 5 11:18:14 GMT 2012 Rank 365 Aligned Residues 63 % Identity 10% Template c3ohwB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:phycobilisome lcm core-membrane linker polypeptide; PDBTitle: x-ray structure of phycobilisome lcm core-membrane linker polypeptide2 (fragment 721-860) from synechocystis sp. pcc 6803, northeast3 structural genomics consortium target sgr209e Resolution 2.70 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.													.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	R	M	F	K	D	V	T	G	H	A	I	G	A	Y	I	R	A	R	R	L	S	K	S	A	V	A	L	R	L	T	A	R	P	I	L	D	I	A	L	Q	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	F	D	S	Q	Q	T	F	T	R	A	F	K	K	Q	F	A	Q	T	P
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	A	A	Y	R	Q	V	F	E	R	D	L	E	P	Y	I	I	N	S	E	F	T	A	L	E	S	K	L	S	N	N	E	I	N	V	K	E	F	I	E	G	L	G	T	S	E	L	Y	X	K	E	F	Y	A	P	Y	P	N	T	K	V	I	E	X	G	T	K	H	F	L	G	R	A	P
Template Known Secondary structure											S	S											T									T	T	S	S											T	S								T	S	S	S														T	S	S
Template Predicted Secondary structure
Template SS confidence
		739	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions