Job Description P0ACI0 Confidence 99.94% Date Thu Jan 5 11:18:14 GMT 2012 Rank 4 Aligned Residues 151 % Identity 18% Template c3lurB_ PDB info PDB header:transcription activator Chain: B: PDB Molecule:putative bacterial transcription regulation protein; PDBTitle: crystal structure of putative bacterial transcription regulation2 protein (np_372959.1) from staphylococcus aureus mu50 at 1.81 a3 resolution Resolution 1.81 Å

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		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																							.	.	.																								.
Query SS confidence																							.	.	.																								.
Query Sequence		P	E	H	K	F	V	T	L	E	D	T	P	L	I	G	V	T	Q	S	Y	S	.	.	.	C	S	L	E	Q	I	S	D	F	R	H	E	M	R	Y	Q	F	W	H	D	F	L	G	.	N	A	P	T	I	P	P	V	L	Y	G	L	N	E	T	R	P	S	Q	D	K	D	D	E	Q	E	V	F	Y	T	T	A
Query Conservation																							.	.	.																								.
Alig confidence																							.	.	.																								.																.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.
Template Sequence		X	E	Y	Q	L	Q	Q	L	A	S	L	T	L	V	G	I	K	E	T	Y	E	N	G	R	Q	A	Q	Q	H	I	A	G	F	W	Q	R	C	Y	Q	E	G	V	I	A	D	L	Q	L	K	N	N	G	D	L	A	G	I	L	G	L	C	I	P	.	.	.	.	.	.	E	L	D	G	K	X	S	Y	X	I	A
Template Known Secondary structure																						S	S																		T	T											S	S	S	S	S								.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																																																																	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		L	A	Q	D	Q	A	D	G	Y	V	L	T	G	H	P	V	M	L	Q	G	G	E	Y	V	M	F	T	Y	E	G	L	G	.	T	G	V	Q	E	F	I	L	T	V	Y	G	T	C	M	P	M	L	N	L	T	R	R	K	G	Q	D	I	E	R	Y	Y	P	A	E	D	A	K	A	G	D	R	P	I	N	L	R
Query Conservation																																		.
Alig confidence							.																											.																																.	.	.	.	.
Template Conservation							.																																																											.	.	.	.	.
Template Sequence		V	T	G	D	N	.	S	A	D	I	A	K	Y	D	V	I	T	L	A	S	S	K	Y	X	V	F	E	A	Q	G	A	V	P	K	A	V	Q	Q	K	X	E	E	V	H	H	Y	I	H	Q	Y	Q	A	N	T	V	K	S	A	P	F	F	E	L	Y	.	.	.	.	.	Q	D	G	D	T	T	S	E	K	Y	I
Template Known Secondary structure						T	.	T	S		T	T	T	S																	S	S	T	T																			T	T	T	B		S	S							.	.	.	.	.		S	S		T	T	S	T	T
Template Predicted Secondary structure							.																																																											.	.	.	.	.
Template SS confidence
		75	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.
		281	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	L	L	I	P	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	I	W	X	P	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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