Job Description P0ACI0 Confidence 51.97% Date Thu Jan 5 11:18:14 GMT 2012 Rank 342 Aligned Residues 49 % Identity 14% Template c2dcuB_ PDB info PDB header:translation Chain: B: PDB Molecule:translation initiation factor 2 beta subunit; PDBTitle: crystal structure of translation initiation factor aif2betagamma2 heterodimer with gdp Resolution 3.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	Q	A	G	I	I	R	D	L	L	I	W	L	E	G	H	L	D	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	L	D	N	V	A	A	K	A	G	Y	S	K	W	H	L	Q	R	M	F	K	D	V	T	G	H	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	Y	E	K	L	L	E	K	A	Y	Q	E	L	P	E	N	V	K	H	H	K	S	R	F	E	V	P	G	A	L	V	T	I	E	G	N	K	T	I	I	E	N	F	K	D	I	A	D	A	L	N	R	D	P	Q	H	L	L	K	F	L	L	R	E	I	A	T	A
Template Known Secondary structure		T												S	S						S	S	S														T	T					T	T									T			S											S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions