Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI0
Confidence99.92%DateThu Jan 5 11:18:14 GMT 2012
Rank5Aligned Residues115
% Identity46%Templatec1bl0A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:protein (multiple antibiotic resistance protein); PDBTitle: multiple antibiotic resistance protein (mara)/dna complex
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  AGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFD
Query Conservation     
      
             
     
   
 
 
    
 
   

   

  
   
      
  

   

 
Alig confidence 















































































Template Conservation     
  
   
         
  

     
   
 
 
    
 
        
   
   
     

  

   

 
Template Sequence  AITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFE
Template Known Secondary structure  TTTTS



SSS
SS




TT
S
Template Predicted Secondary structure 



















Template SS confidence 















































































   10.........20.........30.........40.........50.........60.........70.........80.........
 
   84.....90.........100.........110........
Predicted Secondary structure 















Query SS confidence 


































Query Sequence  SQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPL
Query Conservation      
 
 

   
 

   
              
Alig confidence 


































Template Conservation      
 
 


  
 

  

            
 
Template Sequence  SQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPL
Template Known Secondary structure 
SS
T
SS

STT




Template Predicted Secondary structure 












Template SS confidence 


































   90.........100.........110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions