Job Description P39380 Confidence 78.71% Date Thu Jan 5 12:00:12 GMT 2012 Rank 12 Aligned Residues 75 % Identity 15% Template c2vopA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:lupus la protein; PDBTitle: crystal structure of n-terminal domains of human la protein2 complexed with rna oligomer auuuu Resolution 2.8 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	G	W	A	D	I	D	K	L	I	L	C	A	Q	K	A	G	K	R	L	T	R	A	L	L	D	T	V	V	A	T	S	D	K	K	R	F	S	Y	S	S	D	G	R	C	I	R	A	V	Q	G	H	S	T	S	Q	V	A	I	S	F	A	E	K	T	P	P	Q	F	L	Y	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	G	W	V	P	L	E	I	M	I	K	F	N	R	L	N	R	L	T	T	D	F	N	V	I	V	E	A	L	S	K	S	K	A	E	L	M	E	I	S	E	D	K	T	K	I	R	R	S	P	S	K	P	L	P	E	V	T	D	E	Y	K	N	D	V	K	N	R	S	V	Y	I	K
Template Known Secondary structure		T	T	T	T								T	T	S																			T		S	S							T	T	S	S						T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions