Job Description P39380 Confidence 14.88% Date Thu Jan 5 12:00:12 GMT 2012 Rank 78 Aligned Residues 30 % Identity 17% Template c2k9lA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: structure of the core binding domain of sigma54 Resolution UNK

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		30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		V	L	D	R	E	G	W	A	.	.	D	I	D	K	L	I	L	C	A	Q	K	A	G	K	R	L	T	R	A	L	L	D	T	V	V	A	T
Query Conservation										.	.
Alig confidence										.	.											.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		Y	L	N	E	K	G	F	L	S	K	S	V	E	E	I	S	D	V	L	R	.	.	.	.	.	C	S	V	E	E	L	E	K	V	R	Q	K
Template Known Secondary structure				T	T	S	S	T	T												T	.	.	.	.	.	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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