Job Description P0A7X6 Confidence 100.00% Date Thu Jan 5 11:06:25 GMT 2012 Rank 1 Aligned Residues 171 % Identity 66% Template c3h9nA_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:ribosome maturation factor rimm; PDBTitle: crystal structure of the ribosome maturation factor rimm2 (hi0203) from h.influenzae. northeast structural genomics3 consortium target ir66. Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	I	V	L	G	K	M	G	S	S	Y	G	I	R	G	W	L	R	V	F	S	S	T	E	D	A	E	S	I	F	D	Y	Q	P	W	F	I	Q	K	A	G	Q	W	Q	Q	V	Q	L	E	S	W	K	H	H	N	Q	D	M	I	I	K	L	K	G	V	D	D	R	D	A	A	N	L	L	T	N	C	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	E	V	V	G	K	L	G	S	T	Y	G	I	R	G	W	L	R	I	Y	S	S	T	E	Q	A	E	S	I	F	D	Y	Q	P	W	F	L	K	I	K	G	E	W	Q	S	I	E	L	E	N	W	R	Y	H	N	H	E	I	I	V	K	L	K	G	V	D	D	R	E	A	A	Q	I	L	A	N	V	E	I
Template Known Secondary structure														S	S	S	S								S	S	S	S	G	G	G	G	G			S						T	T													S	S	S							S	S			S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	S	S	Q	L	P	Q	L	E	E	G	D	Y	Y	W	K	D	L	M	G	C	Q	V	V	T	T	E	G	Y	D	L	G	K	V	V	D	M	M	E	T	G	S	N	D	V	L	V	I	K	A	N	L	K	D	A	F	G	I	K	E	R	L	V	P	F	L	D	G	Q	V	I	K	K	V	D	L	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	D	L	S	V	F	P	E	L	E	E	G	D	Y	Y	W	H	D	L	I	G	C	T	V	V	N	L	E	G	Y	T	X	G	T	V	T	E	X	X	E	T	G	S	N	D	V	L	V	V	K	A	N	T	K	D	A	F	G	K	Q	E	R	L	I	P	F	L	Y	E	Q	V	V	K	R	V	D	L	T	T
Template Known Secondary structure												S	S	S		G	G	G	G	G	T	T	T						T	T													S	S	S										T	T		T	T			S								B	T	T	T						G	G	G
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	I	E	V	D	W	D	P	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	I	E	V	D	W	D	A	G	F
Template Known Secondary structure		T								S	S	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions