Job Description P0A7X6 Confidence 100.00% Date Thu Jan 5 11:06:25 GMT 2012 Rank 4 Aligned Residues 159 % Identity 30% Template c2dyiA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:probable 16s rrna-processing protein rimm; PDBTitle: crystal structure of 16s ribosomal rna processing protein rimm from2 thermus thermophilus hb8 Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	P	I	V	L	G	K	M	G	S	S	Y	G	I	R	G	W	L	R	V	F	S	S	T	E	D	A	E	S	I	F	D	Y	Q	P	W	F	I	Q	K	A	G	Q	W	Q	Q	V	Q	L	E	S	W	K	H	H	N	Q	D	M	I	I	K	L	K	G	V	D	D	R	D	A	A	N	L	L	T	N	C	E
Query Conservation
Alig confidence																												.	.	.	.													.	.	.
Template Conservation																												.	.	.	.													.	.	.
Template Sequence		M	R	L	V	E	I	G	R	F	G	A	P	Y	A	L	K	G	G	L	R	F	R	G	E	P	V	.	.	.	.	V	L	H	L	E	R	V	Y	V	E	G	H	.	.	.	G	W	R	A	I	E	D	L	Y	R	V	G	E	E	L	V	V	H	L	A	G	V	T	D	R	T	L	A	E	A	L	V	G	L	R
Template Known Secondary structure															S	S	S	S								G	G	.	.	.	.	G	G	G		S					T	T	T	.	.	.												T	T							T	T			S						T	T	T	T
Template Predicted Secondary structure																												.	.	.	.													.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	V	D	S	S	Q	L	P	Q	L	E	E	G	D	Y	Y	W	K	D	L	M	G	C	Q	V	V	T	T	E	G	Y	D	L	G	K	V	V	D	M	M	E	T	G	S	N	D	V	L	V	I	K	A	N	L	K	D	A	F	G	I	K	E	R	L	V	P	F	L	D	G	Q	V	I	K	K	V	D	L	T
Query Conservation
Alig confidence																														.																																										.			.	.	.
Template Conservation																														.																																										.			.	.	.
Template Sequence		V	Y	A	E	V	A	D	L	P	P	L	E	E	G	R	Y	Y	Y	F	A	L	I	G	L	P	V	Y	V	.	E	G	R	Q	V	G	E	V	V	D	I	L	D	A	G	A	Q	D	V	L	I	I	R	G	V	G	E	R	L	R	D	R	A	E	R	L	V	P	L	Q	A	.	P	Y	.	.	.	V	R	V	E
Template Known Secondary structure						G	G	G	S					T	T								T	T						.	T	T													T	T											S	S	G	G	G	S	T	T					T	T		.	T	T	.	.	.
Template Predicted Secondary structure																														.																																										.			.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.				.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	S	I	E	V	D	W	D	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	S	I	H	V	D	P	I	P	G
Template Known Secondary structure		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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