Email l.a.kelley@imperial.ac.uk Description P76076 Date Thu Jan 5 12:18:15 GMT 2012 Unique Job ID 53c780741f411d85

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1sg7a1 49.3 46 Fold:ChaB-like Superfamily:ChaB-like Family:ChaB-like 2 c1sg7A_ 49.3 46 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative cation transport regulator chab; PDBTitle: nmr solution structure of the putative cation transport2 regulator chab 3 d1lq1a_ 45.0 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:Spo0A 4 d1fc3a_ 44.8 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:Spo0A 5 d2ikba1 26.3 31 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:NMB1012-like 6 c2l9yA_ 22.3 13 PDB header:sugar binding protein Chain: A: PDB Molecule:cvnh-lysm lectin; PDBTitle: solution structure of the mocvnh-lysm module from the rice blast2 fungus magnaporthe oryzae protein (mgg_03307) 7 d2nr7a1 21.7 16 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:NMB1012-like 8 d2jnaa1 18.0 15 Fold:Dodecin subunit-like Superfamily:YdgH-like Family:YdgH-like 9 c2k9iB_ 17.3 24 PDB header:dna binding protein Chain: B: PDB Molecule:plasmid prn1, complete sequence; PDBTitle: nmr structure of plasmid copy control protein orf56 from2 sulfolobus islandicus 10 c2cg4B_ 17.1 23 PDB header:transcription Chain: B: PDB Molecule:regulatory protein asnc; PDBTitle: structure of e.coli asnc 11 c2bw2A_ 16.8 14 PDB header:signaling protein Chain: A: PDB Molecule:bypass of forespore c; PDBTitle: bofc from bacillus subtilis 12 d1ttya_ 14.6 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 13 c1rk8C_ 14.4 22 PDB header:translation Chain: C: PDB Molecule:within the bgcn gene intron protein; PDBTitle: structure of the cytosolic protein pym bound to the mago-2 y14 core of the exon junction complex 14 d1rk8c_ 14.4 22 Fold:WW domain-like Superfamily:Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain Family:Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain 15 c3lpeF_ 14.4 25 PDB header:transferase Chain: F: PDB Molecule:dna-directed rna polymerase subunit e''; PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii 16 d1qqha_ 13.8 27 Fold:E2 regulatory, transactivation domain Superfamily:E2 regulatory, transactivation domain Family:E2 regulatory, transactivation domain 17 c1mgtA_ 13.6 24 PDB header:transferase Chain: A: PDB Molecule:protein (o6-methylguanine-dna methyltransferase); PDBTitle: crystal structure of o6-methylguanine-dna methyltransferase from2 hyperthermophilic archaeon pyrococcus kodakaraensis strain kod1 18 d1gzsb_ 12.5 17 Fold:SopE-like GEF domain Superfamily:SopE-like GEF domain Family:SopE-like GEF domain 19 d2cg4a1 12.5 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 20 d2cyya1 11.8 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 21 c2ysaA_ not modelled 11.7 50 PDB header:metal binding protein Chain: A: PDB Molecule:retinoblastoma-binding protein 6; PDBTitle: solution structure of the zinc finger cchc domain from the2 human retinoblastoma-binding protein 6 (retinoblastoma-3 binding q protein 1, rbq-1) 22 d1tueb_ not modelled 11.6 27 Fold:E2 regulatory, transactivation domain Superfamily:E2 regulatory, transactivation domain Family:E2 regulatory, transactivation domain 23 c2o8xA_ not modelled 11.6 22 PDB header:transcription Chain: A: PDB Molecule:probable rna polymerase sigma-c factor; PDBTitle: crystal structure of the "-35 element" promoter recognition domain of2 mycobacterium tuberculosis sigc 24 d1ku7a_ not modelled 11.3 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 25 d1r6ea_ not modelled 11.3 19 Fold:SopE-like GEF domain Superfamily:SopE-like GEF domain Family:SopE-like GEF domain 26 c1tueG_ not modelled 10.9 27 PDB header:replication Chain: G: PDB Molecule:regulatory protein e2; PDBTitle: the x-ray structure of the papillomavirus helicase in2 complex with its molecular matchmaker e2 27 c3frwF_ not modelled 10.5 16 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:putative trp repressor protein; PDBTitle: crystal structure of putative trpr protein from ruminococcus obeum 28 d2ilaa_ not modelled 10.4 27 Fold:beta-Trefoil Superfamily:Cytokine Family:Interleukin-1 (IL-1) 29 c2c5kP_ not modelled 9.8 21 PDB header:protein transport Chain: P: PDB Molecule:vacuolar protein sorting protein 51; PDBTitle: n-terminal domain of tlg1 complexed with n-terminus of2 vps51 30 c1l0oC_ not modelled 9.6 12 PDB header:protein binding Chain: C: PDB Molecule:sigma factor; PDBTitle: crystal structure of the bacillus stearothermophilus anti-2 sigma factor spoiiab with the sporulation sigma factor3 sigmaf 31 d1l0oc_ not modelled 9.6 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 32 d1rp3a1 not modelled 9.6 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma3 domain 33 c3korD_ not modelled 9.4 16 PDB header:transcription Chain: D: PDB Molecule:possible trp repressor; PDBTitle: crystal structure of a putative trp repressor from staphylococcus2 aureus 34 c2dbbA_ not modelled 9.1 23 PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 35 c2fgtA_ not modelled 8.8 38 PDB header:signaling protein Chain: A: PDB Molecule:two-component system yycf/yycg regulatory PDBTitle: crystal structure of yych from bacillus subtilis 36 c2e1cA_ not modelled 8.6 14 PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex 37 c3h8dC_ not modelled 8.4 21 PDB header:motor protein/signaling protein Chain: C: PDB Molecule:myosin-vi; PDBTitle: crystal structure of myosin vi in complex with dab2 peptide 38 d1qmha1 not modelled 8.4 13 Fold:Thioredoxin fold Superfamily:RNA 3'-terminal phosphate cyclase, RPTC, insert domain Family:RNA 3'-terminal phosphate cyclase, RPTC, insert domain 39 c2c5iP_ not modelled 8.2 21 PDB header:protein transport Chain: P: PDB Molecule:vacuolar protein sorting protein 51; PDBTitle: n-terminal domain of tlg1 complexed with n-terminus of2 vps51 in distorted conformation 40 c2bcmB_ not modelled 7.9 27 PDB header:cell adhesion Chain: B: PDB Molecule:f1845 fimbrial protein; PDBTitle: daae adhesin 41 d1e0ga_ not modelled 7.8 22 Fold:LysM domain Superfamily:LysM domain Family:LysM domain 42 d1z67a1 not modelled 7.7 18 Fold:YidB-like Superfamily:YidB-like Family:YidB-like 43 d1jhga_ not modelled 7.5 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:TrpR-like Family:Trp repressor, TrpR 44 d1pn0a2 not modelled 7.5 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 45 c1or7A_ not modelled 7.4 14 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma-e factor; PDBTitle: crystal structure of escherichia coli sigmae with the cytoplasmic2 domain of its anti-sigma rsea 46 c2ia0A_ not modelled 7.3 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hth-type transcriptional regulator pf0864; PDBTitle: transcriptional regulatory protein pf0864 from pyrococcus furiosus a2 member of the asnc family (pf0864) 47 d1ut1a_ not modelled 7.1 27 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Dr-family adhesin 48 d1i1ga1 not modelled 7.1 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 49 d1h54a2 not modelled 7.1 25 Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:Glycosyltransferase family 36 N-terminal domain 50 c1i1gA_ not modelled 7.0 11 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus 51 d2joka1 not modelled 6.8 40 Fold:SopE-like GEF domain Superfamily:SopE-like GEF domain Family:SopE-like GEF domain 52 c2djpA_ not modelled 6.8 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein sb145; PDBTitle: the solution structure of the lysm domain of human2 hypothetical protein sb145 53 d1mgta1 not modelled 6.6 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Methylated DNA-protein cysteine methyltransferase, C-terminal domain Family:Methylated DNA-protein cysteine methyltransferase, C-terminal domain 54 d1ofcx1 not modelled 6.5 12 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Myb/SANT domain 55 d2a7wa1 not modelled 6.4 13 Fold:all-alpha NTP pyrophosphatases Superfamily:all-alpha NTP pyrophosphatases Family:HisE-like (PRA-PH) 56 c2a7wF_ not modelled 6.4 13 PDB header:hydrolase Chain: F: PDB Molecule:phosphoribosyl-atp pyrophosphatase; PDBTitle: crystal structure of phosphoribosyl-atp pyrophosphatase2 from chromobacterium violaceum (atcc 12472). nesg target3 cvr7 57 c2opkC_ not modelled 6.1 27 PDB header:isomerase Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative mannose-6-phosphate isomerase2 (reut_a1446) from ralstonia eutropha jmp134 at 2.10 a resolution 58 d1s6la1 not modelled 5.8 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MerB N-terminal domain-like 59 d2vera1 not modelled 5.8 20 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Bacterial adhesins Family:Dr-family adhesin 60 c2vbzA_ not modelled 5.5 23 PDB header:dna-binding protein Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan 61 c2krcA_ not modelled 5.4 12 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase 62 c2l4aA_ not modelled 5.4 11 PDB header:dna binding protein Chain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp 63 d1or7a1 not modelled 5.1 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain 64 d2cfxa1 not modelled 5.1 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain